A research paper is any kind of academic writing based on original research which features analysis and interpretation from the author — and it can be a bit overwhelming to begin with! That’s why we created a step-by-step guide on how to write a research paper, where we take you through the academic writing process one manageable piece at a time.
Fundamentals of Homology Modeling Steps and Comparison among Important Bioinformatics Tools: An Overview: Akansha Saxena Halberg Hospital and Research Center, Civil Lines, Moradabad 244 001, U.P., India Rajender Singh Sangwan Central Institute of Medicinal and Aromatic Plants, Near Kukrail Picnic Spot, P.O. CIMAP, Lucknow 226 015, U.P., India.
Nucleic Acids Research, 46: W380-W386 (2018). (Support Information) Jun Hu, Yang Li, Yang Zhang, Dongjun Yu ATPbind: accurate protein-ATP binding site prediction by combining sequence-profiling and structure-based comparisons. Journal of Chemical Information and Modeling, 58: 501-510 (2018).
Modeller, often stylized as MODELLER, is a computer program used for homology modeling to produce models of protein tertiary structures and quaternary structures (rarer). It implements a method inspired by nuclear magnetic resonance spectroscopy of proteins (protein NMR), termed satisfaction of spatial restraints, by which a set of geometrical criteria are used to create a probability density.
CAIDA has been measuring, analyzing, modeling, and visualizing Internet topology since 1998. We seek to characterize macroscopic Internet connectivity using both topological and geographical representations at multiple levels of aggregation granularity. This research goal is particularly challenging due to inconsistencies in different measurement tools and counterincentives for ISPs to support.
THEORY Homology modeling is the computational approaches for protein three-dimensional structure modeling and prediction. Homology modeling builds an atomic model based on experimentally determined known structures that have sequence homology of more than 40%. It is also known as comparative modeling.
Within each step of the homology modelling process, many factors affect the quality of the model produced, and appropriate selection of the program can significantly improve the quality of the model. This review discusses the advantages and limitations of the currently available methods and programs and provides a starting point for novices wishing to create a structural model.
RESEARCH PAPER OPEN ACCESS The putative synaptotagmin protein encoded by the SYT1 gene of the picoplanktonic alga Micromonas is a novel member of C2-domain containing proteins: evidence from in silico characterization and homology modeling Ashutosh Mukherjee Department of Botany, Dinabandhu Mahavidyalaya, Bongaon, North 24 Parganas - 743235.